Âé¶¹ÒùÔº


Sweet potato genetics: How allele dosage shapes crop traits

Study reveals role of allele dosage in improving sweetpotato traits
IbEXPA4 negatively regulates tuberous root formation in sweet potato. Credit: Nature Plants (2024). DOI: 10.1038/s41477-024-01873-y

Sweet potatoes are an agricultural powerhouse that feeds millions globally. However, their complex genetics make it challenging for breeders to understand and improve traits like yield, disease resistance, and nutritional content. A new study reveals insights into the significance of leveraging "allele dosages" in sweet potato breeding practices.

"Sweet potatoes are hexaploid, meaning they have six copies of each chromosome, unlike diploid crops like tomato or rice, which have two," explained Zhangjun Fei, a professor at the Boyce Thompson Institute and one of the study's lead authors.

"This allows for more variation and adaptability but makes selective breeding difficult. Unlike diploid crops, where single genetic changes can have noticeable effects, require a more nuanced approach."

The researchers created a detailed map of genetic variations by analyzing 294 sweet potato varieties. This map didn't just look at what genes were present but also how many copies of favorable variants existed in each plant. They discovered that the differences in allele dosage significantly impact important agricultural traits such as root weight, plant architecture, and flesh color.

The study found that successful breeding programs have unknowingly targeted allele dosage over time. Modern sweet potato varieties tend to have more copies of beneficial alleles compared to their ancestors, which explains why today's crops generally perform better.

The study focused on China, which produces over half of the world's sweet potatoes. The researchers found that Chinese breeders have been especially successful at selecting varieties with optimal gene copies for desirable traits like larger tuberous root size and better growth in crowded conditions.

Through their research, the scientists identified an important candidate gene called IbEXPA4, which was suspected to influence tuberous root weight. They conducted a series of experiments and found that when IbEXPA4 was suppressed, the sweet potato root grew larger, validating the gene's impact on size.

The study, recently in Nature Plants, also revealed how sequence variations alter the expression of the Orange gene, which regulates flesh color. Understanding this mechanism could help breeders develop sweet potatoes with enhanced nutritional content, such as increased beta-carotene.

With this new understanding, can develop improved sweet potato varieties by adjusting dosages at specific locations in the genome. In a world where is a growing concern, this could contribute to creating high-yielding, nutritious, and resilient crop varieties.

More information: Xiangbo Zhang et al, Refining polyploid breeding in sweet potato through allele dosage enhancement, Nature Plants (2024).

Journal information: Nature Plants

Citation: Sweet potato genetics: How allele dosage shapes crop traits (2024, December 12) retrieved 24 May 2025 from /news/2024-12-sweet-potato-genetics-allele-dosage.html
This document is subject to copyright. Apart from any fair dealing for the purpose of private study or research, no part may be reproduced without the written permission. The content is provided for information purposes only.

Explore further

Battling bugs with big data: Sweet potato's genomic-metagenomic pest shield

3 shares

Feedback to editors