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March 12, 2025

Gene related to human kidney disease linked to touch in sea anemones

3D reconstruction of sea anemone neurons. Credit: Nagayasu Nakanishi
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3D reconstruction of sea anemone neurons. Credit: Nagayasu Nakanishi

Biological sciences researchers from the U of A have led the publication of a paper that expands our understanding of sensory neurons in the tentacles of sea anemones, linking them to kidney disease in humans through a common gene.

Analysis of the evolutionary roots of the human ability to hear led the team to closely examine the mechanosensory found on the outside of the tentacles of the sea . Mechanosensation relates to the ability to hear and to sense touch, while hair cells are auditory cells in the vertebrate inner ear that pick up vibrations to enable hearing. Sea anemones have similar-looking cells on their tentacles—also called hair cells—that they use to sense the movements of their prey.

In the paper published in , led by corresponding author Nagayasu Nakanishi, an associate professor of biological sciences at the U of A, researchers found that the gene responsible for kidney disease in humans—polycystic 1 (or PKD-1) gene—is also present in anemones, allowing their hair cells to detect water movement in their environment and facilitate a response.

Because PKD-1 functions as a fluid sensor in kidney cells and is necessary for hearing in mammals, this new finding suggests an evolutionarily ancient role for PKD-1 in sensing fluid movement predating the common ancestor of mammals and living more than 580 million years ago.

A long, erect cilium of a type II hair cell. A 3D projection image of confocal sections through the surface ectoderm of a live tentacle of pouiv::kaede transgenic adult polyp, rotated around the y-axis. pou-iv::kaede expression is shown in gray. The purple arrowhead points to a <50 µm long erect cilium characteristic of type II hair cells. Scale bar: 50 µm. Credit: Nature Communications (2025). DOI: 10.1038/s41467-025-56115-2

Cnidarians, which include jellyfish, corals and sea anemones, are the closest living relatives of animals with bilateral symmetry, such as humans and insects. Though creatures like sea anemones are often assumed to be lacking the sophistication and complexity present in vertebrates, they share many of the same genes as humans, including those responsible for essential functions and serious diseases.

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As such, cnidarians are useful for studying human evolutionary history because features shared by bilateral animals and cnidarians were likely present in our last common ancestor. A feature of note is the mechanosensory system, and both bilaterians and cnidarians use similar sets of genes in mechanoreceptor development.

Unexpectedly, researchers also found that there is not only a single type of mechanosensory neuron on the surface of the anemone tentacle, as previously assumed, but instead at least two unique types of hair cells. The presence of multiple types of mechanosensory neurons present in animals belonging to a group diverging from ours over 580 million years ago suggests that the mechanosensory system of our ancient shared ancestor may be more complex than previously thought, or that cell type diversity of mechanosensory neurons has increased independently in sea anemones and related marine stingers like jellyfish. These discoveries represent a significant step in continued research into the basic foundations of human mechanosensation and the evolution of animal mechanosensory systems.

polycystin-1 is a type-II-hair-cell-specific essential mediator of gentle touch response of oral tentacles in a sea anemone. Credit: Nature Communications (2025). DOI: 10.1038/s41467-025-56115-2
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polycystin-1 is a type-II-hair-cell-specific essential mediator of gentle touch response of oral tentacles in a sea anemone. Credit: Nature Communications (2025). DOI: 10.1038/s41467-025-56115-2

"This paper is the product of years of research conducted by undergraduate and graduate students along with our mentor, Dr. Nakanishi," said Baranyk, a Ph.D. student in biological science who was first author on the paper. "It is so rewarding to see everything come together so that this work can be shared as a contribution to scientific knowledge and to inspire future investigations."

Nakanishi added, "I am thrilled to see our team's efforts—after many 'failed' experiments and some successful ones—paid off. It is always rewarding to witness students gradually mature as scientists, make new discoveries and use the experiences to find paths to even greater things."

A lateral view of a 3D reconstruction of a type II hair cell shown in Figure 1L, rotated around the yaxis. The apical side is up. The cilium—the apical projection—is shown in blue, stereovilli/microvilli in purple, the cell body and basal neurites in cyan, the nucleus within the cell body in blue, and vesicle clouds associated with synapses in yellow. Note that vesicle clouds, and therefore synapses, are located primarily in basal regions including neurites. Credit: Nature Communications (2025). DOI: 10.1038/s41467-025-56115-2

Five of the six co-authors on the paper are affiliated with the U of A. In addition to Baranyk and Nakanishi, Miguel Silva was an M.Sc. student in biological sciences, while two other co-authors, Kristen Malir and Sakura Rieck, were undergraduates working in the Nakanishi Lab at the time the research was conducted. Gracie Scheve was a visiting undergraduate scholar in the Nakanishi lab. Silva and Malir have since graduated.

More information: Julia Baranyk et al, Structural, molecular and developmental evidence for cell-type diversity in cnidarian mechanosensory neurons, Nature Communications (2025).

Journal information: Nature Communications

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Research has identified a link between the PKD-1 gene, associated with human kidney disease, and mechanosensory hair cells in sea anemones. This gene enables anemones to detect water movement, suggesting an ancient evolutionary role in fluid sensing predating the common ancestor of mammals and sea anemones over 580 million years ago. The study also discovered multiple types of mechanosensory neurons in anemones, indicating a more complex mechanosensory system than previously thought.

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