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Nature's warriors: How rice plants detect and defend against viral invaders

A new study has uncovered a molecular mechanism by which rice cells perceive viral infections and initiate antiviral response. This finding significantly contributes to our understanding of virus-host interactions for further disease resistance breeding.
The research was led by Li Yi, professor in the School of Life Sciences at Peking University, and was in Nature on March 12, in an article titled "Perception of viral infections and initiation of antiviral defense in rice."
Viruses affecting rice, a staple food for more than half of the world population, pose persistent threats to crop production and could severely undermine global food security. Though recent discoveries have revealed how rice plants mitigate such threats by initiating immune responses against insect-borne viruses, the molecular mechanism by which plant hosts perceive viral infections and initiate defense remains elusive.
The research team introduced viruses to rice plants via insect vectors, employing natural infection methods that mimic real-world agricultural conditions to provide more accurate insights into plant-virus interactions.
The study uncovered a complete antiviral immune pathway that sets off the following reactions in the plant's immune system:
- Perception and recognition of viral coat proteins mediated by RBRL;
- Degradation of jasmonic acid(JA) signaling pathway repressors;
- Activation of RNA silencing core protein AGO18 expression via the jasmonic acid signaling pathway;
- Upregulation of a synergistic defense mechanism involving AGO18-mediated RNA interference and reactive oxygen species (ROS), which strengthened the plant's ability to fend off the virus.
The study also found that the RING1-IBR-RING2 type ubiquitin ligase(RBRL) in rice can not only recognize the coat protein (CP) of the Rice stripe virus (RSV) but also the coat protein P2 of the Rice dwarf virus (RDV).
Further research indicated that the RSV CP not only induces an upregulation of RBRL expression but also activates the ubiquitin ligase activity of RBRL. This, in turn, promotes the ubiquitination and degradation of the jasmonic acid signaling pathway repressor NOVEL INTERACTOR OF JAZ 3 (NINJA3) mediated by RBRL, thereby activating the jasmonic acid signaling pathway in rice.
The discovery made by Yi's team, combined with their previous research findings, has elucidated a core antiviral pathway in rice. This pathway encompasses the entire chain of processes from the perception of viral infection by rice cells to the activation of the antiviral immune mechanisms in rice. This research represents a milestone in plant virology and crop science, bringing researchers closer to developing a multi-target strategy for antiviral breeding of crops.
More information: Yu Huang et al, Perception of viral infections and initiation of antiviral defence in rice, Nature (2025).
Journal information: Nature
Provided by Peking University