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New method identifies protein that may govern cancer cell movement and metastasis

New method identifies protein that may govern cancer cell movement and metastasis
Credit: Cell Reports (2025). DOI: 10.1016/j.celrep.2025.115502

Using a novel method that gives a readout of which proteins are in specific locations within cells, UT Southwestern Medical Center researchers have identified a protein that plays a key role in cell adhesion and movement. Their findings, in Cell Reports, could help researchers better understand diverse phenomena such as cancer metastasis and cell differentiation.

"Our lab has a longstanding interest in understanding how cells are spatially organized. This work developed a new biochemical method that uncovered the function of a poorly characterized protein called calmin," said W. Mike Henne, Ph.D., Associate Professor of Cell Biology and Biophysics and a member of the Harold C. Simmons Comprehensive Cancer Center at UT Southwestern. He co-led the study with first author Holly Merta, Ph.D., a postdoctoral researcher in the Henne Lab.

Dr. Merta explained that she, Dr. Henne, and their colleagues were originally interested in better understanding how proteins are organized in the (ER), a cellular organelle with a broad range of functions including storing calcium, synthesizing some lipids and cholesterol, and transporting proteins to other cellular locations.

Because the proteins performing these functions are thought to be organized into discrete locations within the ER, the researchers wanted to learn which proteins are found within these different locations.

To do this, they developed an approach called sub-organelle spatial proteomics by combining the gene editing tool CRISPR with TurboID, an enzyme that adds a chemical tag onto all proteins that are in . These tagged proteins can then be isolated and identified. By strategically anchoring TurboID onto different proteins known to localize in specific regions of the cell interior, researchers can create a "map" of the protein landscape.

The researchers fused TurboID to four proteins known to be in different subregions of the ER, then worked with UTSW's Proteomics Core to identify all the tagged proteins. When they examined which proteins were located in the ER's membrane tubules, they were surprised to find calmin, a protein whose function was previously unknown.

New method identifies protein that may govern cancer cell movement and metastasis
This fluorescent microscopy image shows calmin (green), which helps cancer cells move and attach to their environment, enriched at cellular adhesions (magenta) on the tips of actin fibers (blue) at the cell bottom. Credit: UT Southwestern Medical Center

A closer look showed calmin appeared to bind to F-actin, a protein that's part of the cytoskeleton—a network of fibers that helps cells hold their shape, move, and connect with surfaces through sticky junctions called focal adhesions. When the researchers used a genetic trick to deplete calmin in motile cells, the cells moved significantly slower and developed more focal adhesions. Causing cells to overproduce calmin had the opposite effect.

Together, these findings suggest calmin is necessary to break down the F-actin fibers responsible for stabilizing focal adhesions, increasing adhesion turnover. Further experiments suggest calmin does this by increasing molecular signaling that relies on calcium stored in the ER.

Because calmin is often mutated in cancers, Drs. Henne and Merta said this protein may be pivotal for metastasis, the spread of cancer cells beyond the original tumor. Increasing could help metastatic cells survive in their new anatomical locations, establishing secondary tumors.

Calmin has also been identified in developing neurons, where it may be important for growing the long-extension characteristic of these cells. The researchers plan to investigate these possibilities in future studies.

More information: Holly Merta et al, Spatial proteomics of ER tubules reveals CLMN, an ER-actin tether at focal adhesions that promotes cell migration, Cell Reports (2025). . %3Dihub

Journal information: Cell Reports

Citation: New method identifies protein that may govern cancer cell movement and metastasis (2025, April 10) retrieved 21 August 2025 from /news/2025-04-method-protein-cancer-cell-movement.html
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