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Bacterium produces 'organic dishwashing liquid' to degrade oil

Bacterium produces 'organic dishwashing liquid' to degrade oil
The red-marked bacteria with the gene cluster switched off were no longer able to synthesize the detergent. The bacteria were then unable to attach to the surface of oil droplets (left) the way they usually do (right). Credit: Dr. Dörmann’s working group / University of Bonn

The marine bacterium Alcanivorax borkumensis feeds on oil, multiplying rapidly in the wake of oil spills, and thereby accelerating the elimination of pollution, in many cases. It does this by producing an "organic dishwashing liquid" which it uses to attach itself to oil droplets.

Researchers from the University of Bonn, RWTH Aachen University, Heinrich Heine University Dusseldorf and research center Forschungszentrum Julich have now discovered the mechanism by which this organic liquid is synthesized.

in Nature Chemical Biology, the research findings could allow the breeding of more efficient strains of oil-degrading bacteria.

Loosely translated into English, the Latin name of the bacterium is "alkane eaters from Borkum." Indeed, the name says it all, for alkanes are chains of hydrocarbons that exist in petroleum in large quantities. A. borkumensis feeds on energy-rich chains that occur naturally in the sea—and on non-naturally-occurring chains like those dispersed in . In many cases, the bacteria multiply rapidly, thereby accelerating the pollution-clearing process.

Oil and water don't mix

Because of the well-known fact that oil and water don't mix, in order to eat its favorite food, the microscopic sea creature requires a chemical aid. It makes this for itself, producing a kind of natural dishwashing liquid. This "detergent" is a compound consisting of the amino acid glycine and a sugar-fatty acid compound.

"The molecules have a water-soluble part and a fat-soluble part," explains Professor Peter Dormann, who is a biochemist at the University of Bonn's IMBIO institute (Institute of Molecular Âé¶¹ÒùÔºiology and Biotechnology of Plants). "The bacteria settle on the surface of the oil droplets, where they form a biofilm."

The mechanism by which the alkane eater synthesizes this detergent was not understood until a working group led by Professor Karl-Erich Jaeger of Forschungszentrum Julich and the Heinrich Heine University Dusseldorf intensively studied the bacterium's genome.

"In our research we identified a which we believed could play a role in the production of the molecule," Professor Jaeger explains. Indeed, when the genes of this cluster were switched off, the bacteria were impaired in their ability to attach to oil droplets.

"As a result they absorbed less oil, and grew much more slowly," said Professor Lars Blank of RWTH Aachen University.

Potential biotech applications

Jiaxin Cui, a doctoral student of Professor Dormann, ultimately succeeded in elaborating the synthetic pathway by which A. borkumensis produces the detergent. Three enzymes are involved in this process, in which the molecule is assembled step by step. The three genes contain the instructions for building these biocatalysts, without which the bonding process cannot efficiently proceed.

"We successfully transferred the genes involved to a different bacterium, which then produced the detergent as well," Cui explains.

Bacteria like A. borkumensis are important for degrading oil pollution, thus these findings are of significant interest, possibly leading to the development of new, more effective strains.

"This natural could have biotech applications as well, such as for microbial production of key chemical compounds from hydrocarbons," says Dormann, who is a member of the University of Bonn Transdisciplinary Research Area (TRA) "Sustainable Futures."

More information: Jiaxin Cui et al, Biosurfactant biosynthesis by Alcanivorax borkumensis and its role in oil biodegradation, Nature Chemical Biology (2025).

Journal information: Nature Chemical Biology

Provided by University of Bonn

Citation: Bacterium produces 'organic dishwashing liquid' to degrade oil (2025, May 9) retrieved 27 June 2025 from /news/2025-05-bacterium-dishwashing-liquid-degrade-oil.html
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