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Video: DNA rhythms orchestrate gene activity across development

Video: DNA rhythms orchestrate gene activity across development
Credit: Molecular Systems Biology (2025). DOI: 10.1038/s44320-025-00155-9

Biological rhythms aren't just for sleep. In the tiny worm C. elegans, researchers in the Grosshans lab and the Computational Biology Platform of the Friedrich Miescher Institute for Biomedical Research have found thousands of genes that turn on and off in precise patterns during development.

This rhythmic activity unfolds like an orchestra, where every gene plays its part at exactly the right moment. These rhythms happen in multiple tissues—skin-like epithelial cells, specialized muscles, and glands—each expressing its own unique set of genes.

Within each tissue, genes peak at different times. This timing ensures every gene acts exactly when it's needed. Gene activity rhythms are controlled by chromatin—the tightly packed DNA that opens and closes like a gate. This rhythmic chromatin opening precisely matches gene expression cycles.

The researchers built a that predicts when and how strongly chromatin opens by using information from just nine transcription factors—proteins that bind DNA and turn genes on or off. Depleting one of these in C. elegans confirmed the model's predictions, showing it accurately forecasts changes in chromatin dynamics and gene expression.

The findings, in Molecular Systems Biology, reveal a direct link between chromatin timing and gene rhythms, with potential implications for understanding human biological clocks.

Credit: Friedrich Miescher Institute for Biomedical Research

More information: Dimos Gaidatzis et al, A scheduler for rhythmic gene expression, Molecular Systems Biology (2025).

Journal information: Molecular Systems Biology

Citation: Video: DNA rhythms orchestrate gene activity across development (2025, October 15) retrieved 15 October 2025 from /news/2025-10-video-dna-rhythms-orchestrate-gene.html
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