CO2 is messing with coral skeletons
(麻豆淫院) -- An international scientific team has carried out the world鈥檚 first analysis of the impact of ocean acidification on every gene in the coral genome, throwing new light on the likely fate of corals under climate change.
This prodigious research undertaking, involving more than 250 million 鈥榬eads鈥 of genetic material and their detailed interpretation, was carried out by researchers from Australia, France, Netherlands and South Korea using powerful new genetic analysis tools.
In recent years declines in coral calcification have been reported around the world, matching the steady rise in carbon emissions to the atmosphere from human activity.
鈥淓very time we release CO2, it turns the oceans imperceptibly more acidic 鈥 and previous research has shown this to have a harmful effect on corals, plankton and other marine organisms which form their skeletons from calcium and carbonate,鈥 explains Professor David Miller of the ARC Centre of Excellence for Coral Reef Studies (CoECRS) and James Cook University in Australia.
鈥淭his has big implications for the entire food web in the oceans and life on Earth generally,鈥 he said.
鈥淲e knew a more acidic ocean was bad for corals 鈥 but we didn鈥檛 know exactly how it affected them. Our aim was to go back to basics and explore the effect on every gene in the genome of a young coral, and the job it does. This is an essential first step in gaining an accurate grasp of the impact of increased atmospheric CO2 on the world鈥檚 coral reefs and ocean life forms.鈥
Project scientists Dr Aurelie Moya of CoECRS and France鈥檚 Oceanographic Laboratory and Lotte Huisman of CoECRS and Amsterdam University led the experimental work, which involved raising coral larvae to the point where they settle on the reef, placing them in tanks and then exposing them to air bubbles with levels of CO2 of 750-1000 parts per million. This is projected to be the world鈥檚 atmospheric CO2 content by the end of this century, if humanity fails to cut its carbon emissions.
But the really big part of the experiment came when the team analysed the changes in signaling by every single one of the coral鈥檚 20,000-odd genes.
鈥淭his is the first time anyone has looked at the expression of every gene in the coral genome simultaneously. It would have been impossible only a couple of years ago, but there have been huge technological advances,鈥 Professor Miller explains.
鈥淲e were also very fortunate to be able to involve Dr Sylvain Foret, a brilliant young bioinformatician, in the data analysis.鈥
The answers the scientists obtained were both surprising and disturbing.
鈥淢uch to our surprise we found the rising acidity had little effect on the production of ion transport proteins that are responsible for circulating and depositing the calcium carbonate within the coral cells to form its skeleton,鈥 Professor Miller said. 鈥淭hese seemed largely unaffected under high CO2.
鈥淏ut equally surprising were the massive changes we observed in the expression of coral genes involved in the creating the framework required for skeleton formation: some were increased and some decreased.
鈥淥verall it means that a more acidic ocean messes with the skeleton formation process in young corals in disturbing, but highly complex, ways,鈥 he said.
The team carried out their research using juvenile Acropora millepora (staghorn) corals at the stage where they have just settled on a reef, as the ability to form a strong, healthy skeleton is critical in the early stages of a coral鈥檚 life.
鈥淭here have been a lot of conflicting reports in the scientific literature about positive and negative effects of ocean acidification on corals 鈥 and our research shows why. The production of the coral skeleton is a highly complex process, and it is important to address this problem one step at a time and to ask simple questions,鈥 Professor Miller says
鈥淚n terms of the sheer volume of data, these are massive experiments that take a great deal of time to analyse.
鈥淏ut if they give us a clearer understanding of the impact of a more acidic ocean on corals, that will also give us a far better understanding of how best to protect our coral reefs in a world where enormous changes are taking place at great speed,鈥 he said.
The researchers are planning similar whole-of-genome analysis of the effects on corals of the higher ocean temperatures expected under global warming by the end of the century.
Their article 鈥淲hole Transcriptome Analysis of the Coral Acropora millepora Reveals Complex Responses to CO2-driven Acidification during the Initiation of Calcification鈥 by A. Moya, L. Huisman, E.E. Ball, D.C. Hayward5, L.C. Grasso, C.M. Chua, H.N.Woo, J.-P. Gattuso, S. Foret and D.J. Miller is published in the latest online edition of the journal Molecular Ecology.
Provided by James Cook University