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March 26, 2025

Better than the original: New SQL-based service offers tailored biodiversity data cubes for model integration

Credit: GBIF
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Credit: GBIF

The Global Biodiversity Information Facility (GBIF) has enabled a simple, easy-to-use service for creating and downloading species occurrence cubes based on GBIF-mediated data. The service enables users to select their geographic, temporal and taxonomic dimensions of interest to generate customized reports summarizing occurrences in a format suitable for use in biodiversity models and indicators. Its implementation is part of the work of the Horizon Europe project B-Cubed (Biodiversity Building Blocks for Policy).

The new data cube service standardizes access to for producing Essential Biodiversity Variables (EBVs) as well as indicator workflows and models for climate and created by B-Cubed partners. Specific case studies will test the capacity of indicator workflows to capture relevant aspects of biodiversity change based on different policy targets.

By providing species occurrence measures across user-defined dimensions and resolutions, cubes significantly expand the usability of GBIF-mediated data. The ability for users to define biodiversity dimensions across time, space and taxa and obtain species occurrence counts at those resolutions will improve integration with other data sources.

For example, species occurrences have an important role in calibrating and validating biodiversity models derived from , but to date, differences in temporal and spatial resolutions have required considerable data processing. By better matching the scale and resolution, data cubes can aid users to build more robust models of distribution and biodiversity change more efficiently and improve biodiversity baselines and monitor changes over time.

More information: Find out more about the new download function .

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A new SQL-based service from the Global Biodiversity Information Facility allows users to create customized biodiversity data cubes, enhancing the integration of species occurrence data into models and indicators. This service standardizes access to biodiversity data, facilitating the production of Essential Biodiversity Variables and improving model calibration and validation. It enables users to define geographic, temporal, and taxonomic dimensions, improving data usability and model robustness.

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